5VGB date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GOL, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceA Broad-Spectrum Inhibitor of CRISPR-Cas9., Harrington LB, Doxzen KW, Ma E, Liu JJ, Knott GJ, Edraki A, Garcia B, Amrani N, Chen JS, Cofsky JC, Kranzusch PJ, Sontheimer EJ, Davidson AR, Maxwell KL, Doudna JA, Cell. 2017 Sep 7;170(6):1224-1233.e15. doi: 10.1016/j.cell.2017.07.037. Epub 2017, Aug 24. PMID:28844692
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (84 Kb) [Save to disk]
  • Biological Unit Coordinates (5vgb.pdb1.gz) 79 Kb
  • LPC: Ligand-Protein Contacts for 5VGB
  • CSU: Contacts of Structural Units for 5VGB
  • Structure Factors (1350 Kb)
  • Retrieve 5VGB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5VGB from S2C, [Save to disk]
  • View 5VGB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5vgb_A] [5vgb_B]
  • SWISS-PROT database:

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