5VK0 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 9E7, ACE, CL, NH2 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, U, K, S, Q, I, G, M, W, C, E, O


Primary referenceDithiocarbamate-inspired side chain stapling chemistry for peptide drug design., Li X, Tolbert WD, Hu HG, Gohain N, Zou Y, Niu F, He WX, Yuan W, Su JC, Pazgier M, Lu W, Chem Sci. 2018 Nov 30;10(5):1522-1530. doi: 10.1039/c8sc03275k. eCollection 2019 , Feb 7. PMID:30809370
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (376 Kb) [Save to disk]
  • Biological Unit Coordinates (5vk0.pdb1.gz) 34 Kb
  • Biological Unit Coordinates (5vk0.pdb2.gz) 35 Kb
  • Biological Unit Coordinates (5vk0.pdb3.gz) 33 Kb
  • Biological Unit Coordinates (5vk0.pdb4.gz) 34 Kb
  • Biological Unit Coordinates (5vk0.pdb5.gz) 34 Kb
  • Biological Unit Coordinates (5vk0.pdb6.gz) 33 Kb
  • Biological Unit Coordinates (5vk0.pdb7.gz) 34 Kb
  • Biological Unit Coordinates (5vk0.pdb8.gz) 33 Kb
  • Biological Unit Coordinates (5vk0.pdb9.gz) 33 Kb
  • LPC: Ligand-Protein Contacts for 5VK0
  • CSU: Contacts of Structural Units for 5VK0
  • Structure Factors (2923 Kb)
  • Retrieve 5VK0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5VK0 from S2C, [Save to disk]
    • View 5VK0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5vk0_A] [5vk0_B] [5vk0_C] [5vk0_D] [5vk0_E] [5vk0_F] [5vk0_G] [5vk0_H] [5vk0_I] [5vk0_J] [5vk0_K] [5vk0_L] [5vk0_M] [5vk0_N] [5vk0_O] [5vk0_P] [5vk0_Q] [5vk0_R] [5vk0_S] [5vk0_T] [5vk0_U] [5vk0_V] [5vk0_W] [5vk0_X]
  • SWISS-PROT database:

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