5VKO date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand IPA, SEP, TPO enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceA novel SH2 recognition mechanism recruits Spt6 to the doubly phosphorylated RNA polymerase II linker at sites of transcription., Sdano MA, Fulcher JM, Palani S, Chandrasekharan MB, Parnell TJ, Whitby FG, Formosa T, Hill CP, Elife. 2017 Aug 16;6. pii: e28723. doi: 10.7554/eLife.28723. PMID:28826505
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (123 Kb) [Save to disk]
  • Biological Unit Coordinates (5vko.pdb1.gz) 117 Kb
  • LPC: Ligand-Protein Contacts for 5VKO
  • CSU: Contacts of Structural Units for 5VKO
  • Structure Factors (199 Kb)
  • Retrieve 5VKO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5VKO from S2C, [Save to disk]
  • View 5VKO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5vko_A] [5vko_B]
  • SWISS-PROT database:

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