5VYG		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	BGC, CA, XYS	enzyme
Gene Ontology	Chain Function Process Component B, A, C
Primary reference	O-Glycosylation modulates the stability of epidermal growth factor-like repeats and thereby regulates Notch trafficking., Takeuchi H, Yu H, Hao H, Takeuchi M, Ito A, Li H, Haltiwanger RS, J Biol Chem. 2017 Sep 22;292(38):15964-15973. doi: 10.1074/jbc.M117.800102. Epub , 2017 Jul 20. PMID:28729422

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (28 Kb) [Save to disk] Biological Unit Coordinates (5vyg.pdb1.gz) 8 Kb Biological Unit Coordinates (5vyg.pdb2.gz) 8 Kb Biological Unit Coordinates (5vyg.pdb3.gz) 8 Kb LPC: Ligand-Protein Contacts for 5VYG CSU: Contacts of Structural Units for 5VYG Structure Factors (389 Kb) Retrieve 5VYG in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5VYG from S2C, [Save to disk]

View 5VYG in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5vyg_A] [5vyg_B] [5vyg_C] SWISS-PROT database:

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