5VZU	Cell Cycle	date	May 29, 2017
title	Crystal Structure Of The Skp1-Fbxo31-Cyclin D1 Complex
authors	Y.Li, K.Jin, B.Hao
compound		source
Molecule: S-Phase Kinase-Associated Protein 1 Chain: A, C Synonym: Cyclin-Acdk2-Associated Protein P19,P19a,Organ Of Protein 2,Ocp-2,Organ Of Corti Protein II,Ocp-II,Rna Polyme Elongation Factor-Like Protein,Siii,Transcription Elongatio Polypeptide 1-Like,P19skp1; Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Skp1, Emc19, Ocp2, Skp1a, Tceb1l Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_vector_type: Pet15b
Molecule: F-Box Only Protein 31 Chain: B, D Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Fbxo31, Fbx14, Fbx31, Pp2386 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_vector_type: Pet15b
Molecule: Cyclin D1 Chain: E, F Fragment: Unp Residues 109-125 Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
symmetry	Space Group: C 1 2 1	R_factor 0.180 R_Free 0.233
crystal cell	length a length b length c angle alpha angle beta angle gamma 87.679 156.235 155.522 90.00 104.21 90.00
method	X-Ray Diffraction	resolution	2.70 Å
ligand	PO4, ZN	enzyme
Gene Ontology	Chain Function Process Component A, C D, B
Primary reference	Structural basis of the phosphorylation-independent recognition of cyclin D1 by the SCF(FBXO31) ubiquitin ligase., Li Y, Jin K, Bunker E, Zhang X, Luo X, Liu X, Hao B, Proc Natl Acad Sci U S A. 2018 Jan 9;115(2):319-324. doi:, 10.1073/pnas.1708677115. Epub 2017 Dec 26. PMID:29279382

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (398 Kb) [Save to disk] Biological Unit Coordinates (5vzu.pdb1.gz) 196 Kb Biological Unit Coordinates (5vzu.pdb2.gz) 197 Kb LPC: Ligand-Protein Contacts for 5VZU CSU: Contacts of Structural Units for 5VZU Structure Factors (782 Kb) Retrieve 5VZU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5VZU from S2C, [Save to disk]

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5vzu_D] [5vzu_F] [5vzu_C] [5vzu_B] [5vzu_E] [5vzu_A] SWISS-PROT database: Domain organization of by SWISSPFAM

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