5WKG	Immune System	date	Jul 25, 2017
title	Crystal Structure Of Human Cd1b In Complex With Pa
authors	A.Shahine, S.Gras, J.Rossjohn
compound		source
Molecule: T-Cell Surface Glycoprotein Cd1b Chain: A Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Cd1b Expression_system: Trichoplusia Ni Expression_system_taxid: 7111 Expression_system_strain: High Five Expression_system_vector_type: Bacmid
Molecule: Beta-2-Microglobulin Chain: B Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: B2m, Cdabp0092, Hdcma22p Expression_system: Trichoplusia Ni Expression_system_taxid: 7111 Expression_system_strain: High Five Expression_system_vector_type: Bacmid
symmetry	Space Group: P 21 21 21	R_factor 0.171 R_Free 0.224
crystal cell	length a length b length c angle alpha angle beta angle gamma 57.190 78.530 84.710 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.06 Å
ligand	BMA, CL, CUY, D21, EDO, FUC, IOD, MAN, NA, NAG, PEG	enzyme
Gene Ontology	Chain Function Process Component B cellular response to iron io...
Primary reference	A molecular basis of human T cell receptor autoreactivity toward self-phospholipids., Shahine A, Van Rhijn I, Cheng TY, Iwany S, Gras S, Moody DB, Rossjohn J, Sci Immunol. 2017 Oct 20;2(16). pii: eaao1384. doi: 10.1126/sciimmunol.aao1384. PMID:29054999

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (135 Kb) [Save to disk] Biological Unit Coordinates (5wkg.pdb1.gz) 128 Kb LPC: Ligand-Protein Contacts for 5WKG CSU: Contacts of Structural Units for 5WKG Structure Factors (834 Kb) Retrieve 5WKG in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5WKG from S2C, [Save to disk]

View 5WKG in 3D

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Visual 3D analysis of 5WKG

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5wkg_A] [5wkg_B] SWISS-PROT database: Domain organization of by SWISSPFAM

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