5XJG date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand B3P, PE5 enzyme
Primary referenceMechanistic insight into the nucleus-vacuole junction based on the Vac8p-Nvj1p crystal structure., Jeong H, Park J, Kim HI, Lee M, Ko YJ, Lee S, Jun Y, Lee C, Proc Natl Acad Sci U S A. 2017 Jun 6;114(23):E4539-E4548. doi:, 10.1073/pnas.1701030114. Epub 2017 May 22. PMID:28533415
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (168 Kb) [Save to disk]
  • Biological Unit Coordinates (5xjg.pdb1.gz) 163 Kb
  • LPC: Ligand-Protein Contacts for 5XJG
  • CSU: Contacts of Structural Units for 5XJG
  • Structure Factors (565 Kb)
  • Retrieve 5XJG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5XJG from S2C, [Save to disk]
  • Re-refined 5xjg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5XJG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5xjg_A] [5xjg_B] [5xjg_C] [5xjg_D]
  • SWISS-PROT database:

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