5XOF date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand NDG, SIA enzyme
Primary referenceStructural and thermodynamic analyses reveal critical features of glycopeptide recognition by the human PILRalpha immune cell receptor., Furukawa A, Kakita K, Yamada T, Ishizuka M, Sakamoto J, Hatori N, Maeda N, Ohsaka F, Saitoh T, Nomura T, Kuroki K, Nambu H, Arase H, Matsunaga S, Anada M, Ose T, Hashimoto S, Maenaka K, J Biol Chem. 2017 Dec 22;292(51):21128-21136. doi: 10.1074/jbc.M117.799239. Epub , 2017 Oct 18. PMID:29046357
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (94 Kb) [Save to disk]
  • Biological Unit Coordinates (5xof.pdb1.gz) 24 Kb
  • Biological Unit Coordinates (5xof.pdb2.gz) 24 Kb
  • Biological Unit Coordinates (5xof.pdb3.gz) 24 Kb
  • Biological Unit Coordinates (5xof.pdb4.gz) 24 Kb
  • LPC: Ligand-Protein Contacts for 5XOF
  • CSU: Contacts of Structural Units for 5XOF
  • Structure Factors (524 Kb)
  • Retrieve 5XOF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5XOF from S2C, [Save to disk]
    • View 5XOF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5xof_A] [5xof_B] [5xof_C] [5xof_D] [5xof_O] [5xof_P] [5xof_Q] [5xof_R]
  • SWISS-PROT database:

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