5XP8 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure/cleavage-based insights into helical perturbations at bulge sites within T. thermophilus Argonaute silencing complexes., Sheng G, Gogakos T, Wang J, Zhao H, Serganov A, Juranek S, Tuschl T, Patel DJ, Wang Y, Nucleic Acids Res. 2017 Sep 6;45(15):9149-9163. doi: 10.1093/nar/gkx547. PMID:28911094
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (245 Kb) [Save to disk]
  • Biological Unit Coordinates (5xp8.pdb1.gz) 237 Kb
  • LPC: Ligand-Protein Contacts for 5XP8
  • CSU: Contacts of Structural Units for 5XP8
  • Structure Factors (657 Kb)
  • Retrieve 5XP8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5XP8 from S2C, [Save to disk]
  • View 5XP8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5xp8_A] [5xp8_C] [5xp8_E] [5xp8_F]
  • SWISS-PROT database:

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