5Y5Y		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ADP	enzyme
Gene Ontology	Chain Function Process Component A, C, B D, F, E G H I, K L, J M
Primary reference	Cryo EM structure of intact rotary H(+)-ATPase/synthase from Thermus thermophilus., Nakanishi A, Kishikawa JI, Tamakoshi M, Mitsuoka K, Yokoyama K, Nat Commun. 2018 Jan 8;9(1):89. doi: 10.1038/s41467-017-02553-6. PMID:29311594

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (546 Kb) [Save to disk] Biological Unit Coordinates (5y5y.pdb1.gz) 539 Kb LPC: Ligand-Protein Contacts for 5Y5Y CSU: Contacts of Structural Units for 5Y5Y Retrieve 5Y5Y in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5Y5Y from S2C, [Save to disk]

View 5Y5Y in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5y5y_A] [5y5y_B] [5y5y_C] [5y5y_D] [5y5y_E] [5y5y_F] [5y5y_G] [5y5y_H] [5y5y_I] [5y5y_J] [5y5y_K] [5y5y_L] [5y5y_M] SWISS-PROT database:

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