5YPV date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceElucidation of the crystal structure of FabD from the multidrug-resistant bacterium Acinetobacter baumannii., Lee WC, Park J, Balasubramanian PK, Kim Y, Biochem Biophys Res Commun. 2018 Oct 20;505(1):208-214. doi:, 10.1016/j.bbrc.2018.09.079. Epub 2018 Sep 20. PMID:30243724
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk]
  • Biological Unit Coordinates (5ypv.pdb1.gz) 48 Kb
  • CSU: Contacts of Structural Units for 5YPV
  • Structure Factors (793 Kb)
  • Retrieve 5YPV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5YPV from S2C, [Save to disk]
  • View 5YPV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ypv_A]
  • SWISS-PROT database:

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science