5YYC date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand PLP enzyme
Gene
Ontology
ChainFunctionProcessComponent
C, A


Primary referenceStructural features and kinetic characterization of alanine racemase from Bacillus pseudofirmus OF4., Dong H, Hu T, He G, Lu D, Qi J, Dou Y, Long W, He X, Ju J, Su D, Biochem Biophys Res Commun. 2018 Feb 26;497(1):139-145. doi:, 10.1016/j.bbrc.2018.02.041. Epub 2018 Feb 7. PMID:29427660
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (263 Kb) [Save to disk]
  • Biological Unit Coordinates (5yyc.pdb1.gz) 257 Kb
  • LPC: Ligand-Protein Contacts for 5YYC
  • CSU: Contacts of Structural Units for 5YYC
  • Structure Factors (3136 Kb)
  • Retrieve 5YYC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5YYC from S2C, [Save to disk]
  • View 5YYC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5yyc_A] [5yyc_C]
  • SWISS-PROT database:

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