5ZBD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand FAD, TRP enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceProtein engineering for improving the thermostability of tryptophan oxidase and insights from structural analysis., Yamaguchi H, Tatsumi M, Takahashi K, Tagami U, Sugiki M, Kashiwagi T, Kameya M, Okazaki S, Mizukoshi T, Asano Y, J Biochem. 2018 Nov 1;164(5):359-367. doi: 10.1093/jb/mvy065. PMID:30053101
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (152 Kb) [Save to disk]
  • Biological Unit Coordinates (5zbd.pdb1.gz) 146 Kb
  • LPC: Ligand-Protein Contacts for 5ZBD
  • CSU: Contacts of Structural Units for 5ZBD
  • Structure Factors (2286 Kb)
  • Retrieve 5ZBD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5ZBD from S2C, [Save to disk]
  • View 5ZBD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5zbd_A] [5zbd_B]
  • SWISS-PROT database:

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