6AFS date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 1PG, K, MG, PO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceRoles of the Hydrophobic Gate and Exit Channel in Vigna radiata Pyrophosphatase Ion Translocation., Tsai JY, Tang KZ, Li KM, Hsu BL, Chiang YW, Goldman A, Sun YJ, J Mol Biol. 2019 Apr 5;431(8):1619-1632. doi: 10.1016/j.jmb.2019.03.009. Epub, 2019 Mar 13. PMID:30878480
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (233 Kb) [Save to disk]
  • Biological Unit Coordinates (6afs.pdb1.gz) 225 Kb
  • LPC: Ligand-Protein Contacts for 6AFS
  • CSU: Contacts of Structural Units for 6AFS
  • Structure Factors (987 Kb)
  • Retrieve 6AFS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6AFS from S2C, [Save to disk]
  • View 6AFS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6afs_A] [6afs_B]
  • SWISS-PROT database:

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