6CAM Sugar Binding Protein date Jan 31, 2018
title Glucan Binding Protein C Of Streptococcus Mutans Mediates Bo Sucrose-Independent And Sucrose-Dependent Adherence
authors N.Schormann, J.L.Mieher, C.Deivanayagam
compound source
Molecule: Glucan-Binding Protein C
Chain: A
Engineered: Yes
Organism_scientific: Streptococcus Mutans
Organism_taxid: 1309
Atcc: 700610
Gene: Gbpc
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-23d
symmetry Space Group: C 1 2 1
R_factor 0.207 R_Free 0.235
crystal
cell
length a length b length c angle alpha angle beta angle gamma
210.020 47.940 40.089 90.00 96.34 90.00
method X-Ray Diffractionresolution 1.75 Å
ligand BGC, CA enzyme
Primary referenceGlucan Binding Protein C of Streptococcus mutans Mediates both Sucrose-Independent and Sucrose-Dependent Adherence., Mieher JL, Larson MR, Schormann N, Purushotham S, Wu R, Rajashankar KR, Wu H, Deivanayagam C, Infect Immun. 2018 Apr 23. pii: IAI.00146-18. doi: 10.1128/IAI.00146-18. PMID:29685986
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (115 Kb) [Save to disk]
  • Biological Unit Coordinates (6cam.pdb1.gz) 110 Kb
  • LPC: Ligand-Protein Contacts for 6CAM
  • CSU: Contacts of Structural Units for 6CAM
  • Structure Factors (1141 Kb)
  • Retrieve 6CAM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6CAM from S2C, [Save to disk]
  • View 6CAM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6CAM
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6cam_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6CAM
  • Community annotation for 6CAM at PDBWiki (http://pdbwiki.org)

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