6CTH Transferase Transferase Inhibitor date Mar 23, 2018
title Crystal Structure Of Pathogenesis-Related Protein 1g (Pr-1g) Domain From Cacao
authors T.R.Tosarini, G.S.Profeta, C.V.Dos Reis, R.M.Counago, K.B.Massir A.M.Edwards, J.M.Elkins, Structural Genomics Consortium (Sgc)
compound source
Molecule: Concanavalin A-Like Lectin Protein Kinase Family
Chain: A
Fragment: Kinase Domain (Unp Residues 255-560)
Synonym: Pathogenesis-Related Protein 1g
Engineered: Yes
 Organism_scientific: Theobroma Cacao
Organism_common: Cacao
Organism_taxid: 3641
Gene: Tcm_042446
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_variant: R3
symmetry Space Group: P 61 2 2
R_factor 0.208 R_Free 0.238
crystal
cell
length a length b length c angle alpha angle beta angle gamma
56.798 56.798 358.040 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.70 Å
ligand ACT, FE7, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (102 Kb) [Save to disk]
  • Biological Unit Coordinates (6cth.pdb1.gz) 96 Kb
  • LPC: Ligand-Protein Contacts for 6CTH
  • CSU: Contacts of Structural Units for 6CTH
  • Structure Factors (1421 Kb)
  • Retrieve 6CTH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6CTH from S2C, [Save to disk]
    • View 6CTH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6CTH
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6cth_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6CTH
  • Community annotation for 6CTH at PDBWiki (http://pdbwiki.org)

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