6D5J date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CSO, FMT, FV4, GNP, GOL, MG, NA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C


B


Primary referenceDiscovery and Structure-Based Optimization of Benzimidazole-Derived Activators of SOS1-Mediated Nucleotide Exchange on RAS., Hodges TR, Abbott JR, Little AJ, Sarkar D, Salovich JM, Howes J, Akan DT, Sai J, Arnold AL, Browning C, Burns MC, Sobolik T, Sun Q, Beesetty Y, Coker J, Scharn D, Stadtmueller H, Rossanese OW, Phan J, Waterson AG, McConnell DB, Fesik SW, J Med Chem. 2018 Sep 11. doi: 10.1021/acs.jmedchem.8b01108. PMID:30205005
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (303 Kb) [Save to disk]
  • Biological Unit Coordinates (6d5j.pdb1.gz) 295 Kb
  • LPC: Ligand-Protein Contacts for 6D5J
  • CSU: Contacts of Structural Units for 6D5J
  • Structure Factors (3992 Kb)
  • Retrieve 6D5J in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6D5J from S2C, [Save to disk]
  • View 6D5J in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6d5j_A] [6d5j_B] [6d5j_C]
  • SWISS-PROT database:

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