6D84		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	GTP, MG	enzyme
Gene Ontology	Chain Function Process Component B, F H, C, N, I phospholipase D activator ac... K, G M, P O, R, L, T S, Q
Primary reference	HIV-1 Nefs Are Cargo-Sensitive AP-1 Trimerization Switches in Tetherin Downregulation., Morris KL, Buffalo CZ, Sturzel CM, Heusinger E, Kirchhoff F, Ren X, Hurley JH, Cell. 2018 Jul 26;174(3):659-671.e14. doi: 10.1016/j.cell.2018.07.004. PMID:30053425

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (607 Kb) [Save to disk] Biological Unit Coordinates (6d84.pdb1.gz) 595 Kb LPC: Ligand-Protein Contacts for 6D84 CSU: Contacts of Structural Units for 6D84 Retrieve 6D84 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6D84 from S2C, [Save to disk]

View 6D84 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6d84_B] [6d84_C] [6d84_F] [6d84_G] [6d84_H] [6d84_I] [6d84_K] [6d84_L] [6d84_M] [6d84_N] [6d84_O] [6d84_P] [6d84_Q] [6d84_R] [6d84_S] [6d84_T] SWISS-PROT database:

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