6DAQ date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 9KP, KPI enzyme
Gene
Ontology
ChainFunctionProcessComponent
D, A, B, C


Primary referenceStructural Characterization of the Hydratase-Aldolases, NahE and PhdJ: Implications for the Specificity, Catalysis, and N-Acetylneuraminate Lyase Subgroup of the Aldolase Superfamily., LeVieux JA, Medellin B, Johnson WH Jr, Erwin K, Li W, Johnson IA, Zhang YJ, Whitman CP, Biochemistry. 2018 Jun 26;57(25):3524-3536. doi: 10.1021/acs.biochem.8b00532., Epub 2018 Jun 11. PMID:29856600
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (221 Kb) [Save to disk]
  • Biological Unit Coordinates (6daq.pdb1.gz) 215 Kb
  • LPC: Ligand-Protein Contacts for 6DAQ
  • CSU: Contacts of Structural Units for 6DAQ
  • Structure Factors (2037 Kb)
  • Retrieve 6DAQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6DAQ from S2C, [Save to disk]
  • View 6DAQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6daq_A] [6daq_B] [6daq_C] [6daq_D]
  • SWISS-PROT database:

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science