6DBS date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BMA, MAN, NAG enzyme
Primary referenceFusion surface structure, function, and dynamics of gamete fusogen HAP2., Feng J, Dong X, Pinello J, Zhang J, Lu C, Iacob RE, Engen JR, Snell WJ, Springer TA, Elife. 2018 Oct 3;7. pii: 39772. doi: 10.7554/eLife.39772. PMID:30281023
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (502 Kb) [Save to disk]
  • Biological Unit Coordinates (6dbs.pdb1.gz) 493 Kb
  • LPC: Ligand-Protein Contacts for 6DBS
  • CSU: Contacts of Structural Units for 6DBS
  • Structure Factors (1390 Kb)
  • Retrieve 6DBS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6DBS from S2C, [Save to disk]
  • View 6DBS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6dbs_A] [6dbs_B] [6dbs_C]
  • SWISS-PROT database:

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