6DE7		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	BMA, MAN, NAG, SO4	enzyme
Gene Ontology	Chain Function Process Component B G L
Primary reference	Interdomain Stabilization Impairs CD4 Binding and Improves Immunogenicity of the HIV-1 Envelope Trimer., Zhang P, Gorman J, Geng H, Liu Q, Lin Y, Tsybovsky Y, Go EP, Dey B, Andine T, Kwon A, Patel M, Gururani D, Uddin F, Guzzo C, Cimbro R, Miao H, McKee K, Chuang GY, Martin L, Sironi F, Malnati MS, Desaire H, Berger EA, Mascola JR, Dolan MA, Kwong PD, Lusso P, Cell Host Microbe. 2018 Jun 13;23(6):832-844.e6. doi: 10.1016/j.chom.2018.05.002. PMID:29902444

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (486 Kb) [Save to disk] Biological Unit Coordinates (6de7.pdb1.gz) 1405 Kb LPC: Ligand-Protein Contacts for 6DE7 CSU: Contacts of Structural Units for 6DE7 Structure Factors (345 Kb) Retrieve 6DE7 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6DE7 from S2C, [Save to disk]

View 6DE7 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6de7_E] [6de7_G] [6de7_H] [6de7_L] [6de7_B] [6de7_D] SWISS-PROT database:

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---