6DRU date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BGC, BMA, GAL, GOL, MAN, NAG, XYS enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceCrystal Structure of alpha-Xylosidase from Aspergillus niger in Complex with a Hydrolyzed Xyloglucan Product and New Insights in Accurately Predicting Substrate Specificities of GH31 Family Glycosidases., Cao H, Walton JD, Brumm P, Phillips GN Jr, ACS Sustain Chem Eng. 2020 Feb 17;8(6):2540-2547. doi:, 10.1021/acssuschemeng.9b07073. Epub 2020 Jan 23. PMID:32161692
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (261 Kb) [Save to disk]
  • Biological Unit Coordinates (6dru.pdb1.gz) 495 Kb
  • Biological Unit Coordinates (6dru.pdb2.gz) 250 Kb
  • LPC: Ligand-Protein Contacts for 6DRU
  • CSU: Contacts of Structural Units for 6DRU
  • Structure Factors (985 Kb)
  • Retrieve 6DRU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6DRU from S2C, [Save to disk]
  • View 6DRU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6dru_A] [6dru_B]
  • SWISS-PROT database:

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