6E7B Structural Protein date Jul 25, 2018
title 13-Pf 3-Start Gmpcpp-Human Alpha1bbeta3 Microtubules
authors S.C.Ti, G.M.Alushin, T.M.Kapoor
compound source
Molecule: Tubulin Beta-3 Chain
Chain: B
Synonym: Tubulin Beta-4 Chain,Tubulin Beta-III
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tubb3, Tubb4
Expression_system: Trichoplusia Ni
Expression_system_taxid: 7111

Molecule: Tubulin Alpha-1b Chain
Chain: A
Synonym: Alpha-Tubulin Ubiquitous,Tubulin K-Alpha-1,Tubulin Ubiquitous Chain;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tuba1b
Expression_system: Trichoplusia Ni
Expression_system_taxid: 7111
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.50 Å
ligand G2P, GTP, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B
  • netrin receptor binding


    • Primary referenceHuman beta-Tubulin Isotypes Can Regulate Microtubule Protofilament Number and Stability., Ti SC, Alushin GM, Kapoor TM, Dev Cell. 2018 Sep 18. pii: S1534-5807(18)30684-1. doi:, 10.1016/j.devcel.2018.08.014. PMID:30245156
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (124 Kb) [Save to disk]
  • Biological Unit Coordinates (6e7b.pdb1.gz) 121 Kb
  • LPC: Ligand-Protein Contacts for 6E7B
  • CSU: Contacts of Structural Units for 6E7B
  • Retrieve 6E7B in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6E7B from S2C, [Save to disk]
    • View 6E7B in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6E7B
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6e7b_B] [6e7b_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6E7B
  • Community annotation for 6E7B at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science