6FCV Protein Binding date Dec 21, 2017
title Structure Of The Human Ddb1-Csa Complex
authors E.M.Meulenbroek, N.S.Pannu
compound source
Molecule: Dna Damage-Binding Protein 1
Chain: A
Synonym: Ddb P127 Subunit,Dna Damage-Binding Protein A,Ddba Specific Dna-Binding Protein 1,Hbv X-Associated Protein 1,X Damaged Dna-Binding Factor,Uv-Damaged Dna-Binding Protein 1 Xpe-Binding Factor,Xpe-Bf,Xeroderma Pigmentosum Group E-Com Protein,Xpce;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ddb1, Xap1
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108

Molecule: Dna Excision Repair Protein Ercc-8
Chain: B
Synonym: Cockayne Syndrome Wd Repeat Protein Csa
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ercc8, Ckn1, Csa
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
symmetry Space Group: P 32 2 1
R_factor 0.193 R_Free 0.245
crystal
cell
length a length b length c angle alpha angle beta angle gamma
140.790 140.790 249.331 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.92 Å
Gene
Ontology
ChainFunctionProcessComponent
A


B
  • DNA helicase activity


    • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (240 Kb) [Save to disk]
  • Biological Unit Coordinates (6fcv.pdb1.gz) 234 Kb
  • CSU: Contacts of Structural Units for 6FCV
  • Structure Factors (1834 Kb)
  • Retrieve 6FCV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6FCV from S2C, [Save to disk]
    • View 6FCV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6FCV
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6fcv_B] [6fcv_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6FCV
  • Community annotation for 6FCV at PDBWiki (http://pdbwiki.org)

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