6FJ4	Hydrolase	date	Jan 19, 2018
title	Structure Of Fae Solved By Sad From Data Collected At The Pe Selenium Absorption Edge On Id30b
authors	A.A.Mccarthy, C.Mueller-Dieckmann
compound		source
Molecule: Endo-1,4-Beta-Xylanase Y Chain: A Synonym: Xylanase Y,1,4-Beta-D-Xylan Xylanohydrolase Y,Xyly Ec: 3.2.1.8 Engineered: Yes		Organism_scientific: Clostridium Thermocellum Organism_common: Ruminiclostridium Thermocellum Organism_taxid: 1515 Gene: Xyny Expression_system: Escherichia Coli Bl21 Expression_system_taxid: 511693
symmetry	Space Group: P 41 21 2	R_factor 0.160 R_Free 0.178
crystal cell	length a length b length c angle alpha angle beta angle gamma 112.023 112.023 65.865 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.70 Å
ligand	CD, GOL, MSE, SEP, SO4	enzyme	Hydrolase E.C.3.2.1.8 BRENDA
Primary reference	ID30B - a versatile beamline for macromolecular crystallography experiments at the ESRF., McCarthy AA, Barrett R, Beteva A, Caserotto H, Dobias F, Felisaz F, Giraud T, Guijarro M, Janocha R, Khadrouche A, Lentini M, Leonard GA, Lopez Marrero M, Malbet-Monaco S, McSweeney S, Nurizzo D, Papp G, Rossi C, Sinoir J, Sorez C, Surr J, Svensson O, Zander U, Cipriani F, Theveneau P, Mueller-Dieckmann C, J Synchrotron Radiat. 2018 Jul 1;25(Pt 4):1249-1260. doi:, 10.1107/S1600577518007166. Epub 2018 Jun 27. PMID:29979188

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk] Biological Unit Coordinates (6fj4.pdb1.gz) 52 Kb LPC: Ligand-Protein Contacts for 6FJ4 CSU: Contacts of Structural Units for 6FJ4 Structure Factors (1259 Kb) Retrieve 6FJ4 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6FJ4 from S2C, [Save to disk]

View 6FJ4 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 6FJ4

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6fj4_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 6FJ4

Community annotation for 6FJ4 at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---