6GDT		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	EDO	enzyme
Gene Ontology	Chain Function Process Component E, A, C, D, B
Primary reference	Structure of the GH9 glucosidase/glucosaminidase from Vibrio cholerae., Wu L, Davies GJ, Acta Crystallogr F Struct Biol Commun. 2018 Aug 1;74(Pt 8):512-523. doi:, 10.1107/S2053230X18011019. Epub 2018 Aug 6. PMID:30084401

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (456 Kb) [Save to disk] Biological Unit Coordinates (6gdt.pdb1.gz) 183 Kb Biological Unit Coordinates (6gdt.pdb2.gz) 183 Kb Biological Unit Coordinates (6gdt.pdb3.gz) 95 Kb LPC: Ligand-Protein Contacts for 6GDT CSU: Contacts of Structural Units for 6GDT Structure Factors (3184 Kb) Retrieve 6GDT in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6GDT from S2C, [Save to disk]

View 6GDT in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6gdt_B] [6gdt_A] [6gdt_C] [6gdt_D] [6gdt_E] SWISS-PROT database:

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