6GYB date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
R, r, i, C, O, F, u, L, o, c, f, l, U, I


Primary referenceCryo-EM structure of the bacteria-killing type IV secretion system core complex from Xanthomonas citri., Sgro GG, Costa TRD, Cenens W, Souza DP, Cassago A, Coutinho de Oliveira L, Salinas RK, Portugal RV, Farah CS, Waksman G, Nat Microbiol. 2018 Oct 22. pii: 10.1038/s41564-018-0262-z. doi:, 10.1038/s41564-018-0262-z. PMID:30349081
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1076 Kb) [Save to disk]
  • Biological Unit Coordinates (6gyb.pdb1.gz) 1058 Kb
  • CSU: Contacts of Structural Units for 6GYB
  • Retrieve 6GYB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6GYB from S2C, [Save to disk]
  • View 6GYB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6gyb_p] [6gyb_A] [6gyb_B] [6gyb_C] [6gyb_D] [6gyb_E] [6gyb_F] [6gyb_G] [6gyb_H] [6gyb_I] [6gyb_J] [6gyb_K] [6gyb_L] [6gyb_M] [6gyb_N] [6gyb_O] [6gyb_P] [6gyb_Q] [6gyb_R] [6gyb_S] [6gyb_T] [6gyb_U] [6gyb_a] [6gyb_b] [6gyb_c] [6gyb_d] [6gyb_e] [6gyb_f] [6gyb_g] [6gyb_h] [6gyb_i] [6gyb_j] [6gyb_k] [6gyb_l] [6gyb_m] [6gyb_n] [6gyb_o] [6gyb_q] [6gyb_r] [6gyb_s] [6gyb_t] [6gyb_u]
  • SWISS-PROT database:

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