6K5E Hydrolase date May 28, 2019
title Crystal Structure Of Bioh From Klebsiella Pneumonia
authors L.Wang, Y.Chen
compound source
Molecule: Pimeloyl-[Acyl-Carrier Protein] Methyl Ester Este
Chain: A, B, C, D, E, F
Synonym: Biotin Synthesis Protein Bioh,Carboxylesterase Bio
Ec: 3.1.1.85
Engineered: Yes
 Organism_scientific: Klebsiella Pneumoniae
Organism_taxid: 573
Gene: Bioh
Expression_system: Escherichia Coli K-12
Expression_system_taxid: 83333
Expression_system_strain: K-12
symmetry Space Group: C 2 2 21
R_factor 0.191 R_Free 0.276
crystal
cell
length a length b length c angle alpha angle beta angle gamma
107.642 109.531 292.857 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.26 Å
ligand
enzyme Hydrolase E.C.3.1.1.85 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (250 Kb) [Save to disk]
  • Biological Unit Coordinates (6k5e.pdb1.gz) 125 Kb
  • Biological Unit Coordinates (6k5e.pdb2.gz) 122 Kb
  • CSU: Contacts of Structural Units for 6K5E
  • Structure Factors (1735 Kb)
  • Retrieve 6K5E in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6K5E from S2C, [Save to disk]
    • View 6K5E in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6K5E
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6k5e_A] [6k5e_F] [6k5e_D] [6k5e_C] [6k5e_B] [6k5e_E]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6K5E
  • Community annotation for 6K5E at PDBWiki (http://pdbwiki.org)

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