6LFR Hydrolase date Dec 03, 2019
title Poa1p In Complex With Adp-Ribose
authors Y.C.Chiu, C.H.Hsu
compound source
Molecule: Adp-Ribose 1''-Phosphate Phosphatase
Chain: A
Synonym: [Protein Adp-Ribosylglutamate] Hydrolase
Ec: 3.1.3.84,3.2.2.-
Engineered: Yes
Organism_scientific: Saccharomyces Cerevisiae S288c
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: S288c
Gene: Poa1, Ybr022w, Ybr0304
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 64
R_factor 0.175 R_Free 0.203
crystal
cell
length a length b length c angle alpha angle beta angle gamma
85.619 85.619 37.945 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.78 Å
ligand APR enzyme Hydrolase E.C.3.1.3.84 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (65 Kb) [Save to disk]
  • Biological Unit Coordinates (6lfr.pdb1.gz) 58 Kb
  • LPC: Ligand-Protein Contacts for 6LFR
  • CSU: Contacts of Structural Units for 6LFR
  • Structure Factors (523 Kb)
  • Retrieve 6LFR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6LFR from S2C, [Save to disk]
  • View 6LFR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6LFR
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6lfr_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6LFR
  • Community annotation for 6LFR at PDBWiki (http://pdbwiki.org)

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