6MCC Hydrolase Rna Viral Protein date Aug 31, 2018
title Cryoem Structure Of Acriia2 Homolog In Complex With Crispr-C
authors F.Jiang, J.J.Liu, J.A.Doudna
compound source
Molecule: Single Guide Rna (116-Mer)
Chain: B
Engineered: Yes
Organism_scientific: Streptococcus Pyogenes M1 Gas
Organism_taxid: 160490
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Crispr-Associated Endonuclease Cas9
Chain: A
Ec: 3.1.-.-
Engineered: Yes

Organism_scientific: Streptococcus Pyogenes M1 Gas
Organism_taxid: 160490
Gene: Cas9, M1gas476_0830
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Anti-Crispr Acriia2 Homolog
Chain: C
Synonym: Acriia2b.3
Engineered: Yes

Organism_scientific: Listeria Phage Lp-101
Organism_taxid: 1458856
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.90 Å
ligand GTP enzyme Hydrolase E.C.3.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • nuclease activity
  • endonuclease activity


  • Primary referenceTemperature-Responsive Competitive Inhibition of CRISPR-Cas9., Jiang F, Liu JJ, Osuna BA, Xu M, Berry JD, Rauch BJ, Nogales E, Bondy-Denomy J, Doudna JA, Mol Cell. 2018 Dec 19. pii: S1097-2765(18)30986-9. doi:, 10.1016/j.molcel.2018.11.016. PMID:30595438
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (259 Kb) [Save to disk]
  • Biological Unit Coordinates (6mcc.pdb1.gz) 254 Kb
  • LPC: Ligand-Protein Contacts for 6MCC
  • CSU: Contacts of Structural Units for 6MCC
  • Retrieve 6MCC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6MCC from S2C, [Save to disk]
  • View 6MCC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6MCC
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6mcc_B] [6mcc_A] [6mcc_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6MCC
  • Community annotation for 6MCC at PDBWiki (http://pdbwiki.org)

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