6MDV		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	BMA, CA, MAN, NAG	enzyme
Gene Ontology	Chain Function Process Component B, A
Primary reference	Molecular Basis of Broad Spectrum N-Glycan Specificity and Processing of Therapeutic IgG Monoclonal Antibodies by Endoglycosidase S2., Klontz EH, Trastoy B, Deredge D, Fields JK, Li C, Orwenyo J, Marina A, Beadenkopf R, Gunther S, Flores J, Wintrode PL, Wang LX, Guerin ME, Sundberg EJ, ACS Cent Sci. 2019 Mar 27;5(3):524-538. doi: 10.1021/acscentsci.8b00917. Epub, 2019 Feb 6. PMID:30937380

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (266 Kb) [Save to disk] Biological Unit Coordinates (6mdv.pdb1.gz) 131 Kb Biological Unit Coordinates (6mdv.pdb2.gz) 131 Kb LPC: Ligand-Protein Contacts for 6MDV CSU: Contacts of Structural Units for 6MDV Structure Factors (3718 Kb) Retrieve 6MDV in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6MDV from S2C, [Save to disk]

View 6MDV in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6mdv_A] [6mdv_B] SWISS-PROT database:

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---