6MOF Biosynthetic Protein date Oct 04, 2018
title Monomeric Darpin G2 Complex With Epor
authors K.M.Jude, K.Mohan, K.C.Garcia
compound source
Molecule: G2 Darpin
Chain: A
Engineered: Yes
Organism_scientific: Synthetic Construct
Organism_taxid: 32630
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Erythropoietin Receptor
Chain: B
Synonym: Epo-R
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Epor
Expression_system: Trichoplusia Ni
Expression_system_taxid: 7111
symmetry Space Group: P 41 21 2
R_factor 0.224 R_Free 0.266
crystal
cell
length a length b length c angle alpha angle beta angle gamma
108.834 108.834 96.264 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.89 Å
ligand EDO enzyme
Gene
Ontology
ChainFunctionProcessComponent
B


Primary referenceTopological control of cytokine receptor signaling induces differential effects in hematopoiesis., Mohan K, Ueda G, Kim AR, Jude KM, Fallas JA, Guo Y, Hafer M, Miao Y, Saxton RA, Piehler J, Sankaran VG, Baker D, Garcia KC, Science. 2019 May 24;364(6442). pii: 364/6442/eaav7532. doi:, 10.1126/science.aav7532. Epub 2019 May 23. PMID:31123111
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (126 Kb) [Save to disk]
  • Biological Unit Coordinates (6mof.pdb1.gz) 121 Kb
  • LPC: Ligand-Protein Contacts for 6MOF
  • CSU: Contacts of Structural Units for 6MOF
  • Structure Factors (1730 Kb)
  • Retrieve 6MOF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6MOF from S2C, [Save to disk]
  • View 6MOF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6MOF
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6mof_B] [6mof_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6MOF
  • Community annotation for 6MOF at PDBWiki (http://pdbwiki.org)

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