6NE0 Immune System Rna date Dec 15, 2018
title Structure Of Double-Stranded Target Dna Engaged Csy Complex Pseudomonas Aeruginosa (Pa-14)
authors S.Chowdhury, M.F.Rollins, J.Carter, S.M.Golden, H.M.Miettinen, A. Frangos, D.Faith, M.C.Lawrence, B.Wiedenheft, G.C.Lander
compound source
Molecule: Crispr-Associated Protein Csy1
Chain: A
Synonym: Crispr Type I-F Associated Protein Csy1 (Cas 8f)
Engineered: Yes
Other_details: Gaps Within The Structure Correspond To Regi Could Not Be Modeled Due To Missing Map Density.;
 Organism_scientific: Pseudomonas Aeruginosa Ucbpp-Pa14
Organism_taxid: 208963
Strain: Ucbpp-Pa14
Gene: Csy1, Pa14_33330
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008

Molecule: Crispr-Associated Protein Csy2
Chain: B
Synonym: Crispr Type I-F Associated Protein Csy2 (Cas 5f)
Engineered: Yes
Other_details: Gaps Within The Structure Correspond To Regi Could Not Be Modeled Due To Missing Map Density.;
Organism_scientific: Pseudomonas Aeruginosa Ucbpp-Pa14
Organism_taxid: 208963
Strain: Ucbpp-Pa14
Gene: Csy2, Pa14_33320
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008

Molecule: Crispr-Associated Protein Csy3
Chain: C, D, E, F, G, H
Synonym: Crispr Type I-F Associated Protein Csy3 (Cas7.1f-7
Engineered: Yes
Other_details: Gaps Within The Structure Correspond To Regi Could Not Be Modeled Due To Missing Map Density.;
Organism_scientific: Pseudomonas Aeruginosa Ucbpp-Pa14
Organism_taxid: 208963
Strain: Ucbpp-Pa14
Gene: Csy3, Csy1-3, Pa14_33310
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008

Molecule: Crispr-Associated Endonuclease Cas6csy4
Chain: L
Synonym: Crispr Type I-F Associated Protein Csy4 (Cas6f)
Ec: 3.1.-.-
Engineered: Yes
Organism_scientific: Pseudomonas Aeruginosa Ucbpp-Pa14
Organism_taxid: 208963
Strain: Ucbpp-Pa14
Gene: Cas6f, Csy4, Pa14_33300
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008

Molecule: Crispr Rna (60-Mer)
Chain: M
Engineered: Yes
Other_details: Gaps Within The Structure Correspond To Regi Could Not Be Modeled Due To Missing Map Density.;
Synthetic: Yes
Organism_scientific: Pseudomonas Aeruginosa Ucbpp-Pa14
Organism_taxid: 208963

Molecule: Crispr Target Dna (44-Mer)
Chain: N
Engineered: Yes
Synthetic: Yes
Organism_scientific: Pseudomonas Aeruginosa Ucbpp-Pa14
Organism_taxid: 208963

Molecule: Non-Complementary R-Loop Dna Strand
Chain: O
Engineered: Yes
Other_details: Gaps Within The Structure Correspond To Regi Could Not Be Modeled Due To Missing Map Density.
Synthetic: Yes
Organism_scientific: Pseudomonas Aeruginosa Ucbpp-Pa14
Organism_taxid: 208963
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.40 Å
ligand
enzyme Hydrolase E.C.3.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


B


F, E, H, C, D, G


L
  • nuclease activity
  • endonuclease activity


    • Primary referenceStructure Reveals a Mechanism of CRISPR-RNA-Guided Nuclease Recruitment and Anti-CRISPR Viral Mimicry., Rollins MF, Chowdhury S, Carter J, Golden SM, Miettinen HM, Santiago-Frangos A, Faith D, Lawrence CM, Lander GC, Wiedenheft B, Mol Cell. 2019 Mar 1. pii: S1097-2765(19)30091-7. doi:, 10.1016/j.molcel.2019.02.001. PMID:30872121
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (434 Kb) [Save to disk]
  • Biological Unit Coordinates (6ne0.pdb1.gz) 427 Kb
  • CSU: Contacts of Structural Units for 6NE0
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    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ne0_H] [6ne0_D] [6ne0_F] [6ne0_M] [6ne0_B] [6ne0_A] [6ne0_C] [6ne0_E] [6ne0_G] [6ne0_N] [6ne0_O] [6ne0_L]
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