6PYP date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 3SY, K, NAD, PO4, POP enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceModeling the Role of a Flexible Loop and Active Site Side Chains in Hydride Transfer Catalyzed by Glycerol-3-phosphate Dehydrogenase., Mhashal AR, Romero-Rivera A, Mydy LS, Cristobal JR, Gulick AM, Richard JP, Kamerlin SCL, ACS Catal. 2020 Oct 2;10(19):11253-11267. doi: 10.1021/acscatal.0c02757. Epub, 2020 Sep 3. PMID:33042609
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (204 Kb) [Save to disk]
  • Biological Unit Coordinates (6pyp.pdb1.gz) 198 Kb
  • LPC: Ligand-Protein Contacts for 6PYP
  • CSU: Contacts of Structural Units for 6PYP
  • Structure Factors (2006 Kb)
  • Retrieve 6PYP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6PYP from S2C, [Save to disk]
  • View 6PYP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6pyp_A] [6pyp_B]
  • SWISS-PROT database:

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science