6QIN Hydrolase date Jan 21, 2019
title Crystal Structure Of The Pmgl2 Esterase From Permafrost Meta Library
authors K.M.Boyko, A.Y.Nikolaeva, D.A.Korzhenevskiy, M.V.Kryukova, L.E.Petrovskaya, K.A.Novototskaya-Vlasova, E.M.Rivkina, D.A.Do M.P.Kirpichnikov, V.O.Popov
compound source
Molecule: Pmgl2
Chain: A, B
Ec: 3.1.1.3
Engineered: Yes
 Organism_scientific: Permafrost Metagenome
Organism_taxid: 1082480
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.157 R_Free 0.187
crystal
cell
length a length b length c angle alpha angle beta angle gamma
47.010 92.350 74.230 90.00 106.83 90.00
method X-Ray Diffractionresolution 1.60 Å
ligand CL, MG enzyme Hydrolase E.C.3.1.1.3 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (112 Kb) [Save to disk]
  • Biological Unit Coordinates (6qin.pdb1.gz) 107 Kb
  • LPC: Ligand-Protein Contacts for 6QIN
  • CSU: Contacts of Structural Units for 6QIN
  • Structure Factors (3348 Kb)
  • Retrieve 6QIN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6QIN from S2C, [Save to disk]
    • View 6QIN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6QIN
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6qin_B] [6qin_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6QIN
  • Community annotation for 6QIN at PDBWiki (http://pdbwiki.org)

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