6QUY Structural Protein date Feb 28, 2019
title Ngckk (N.Gruberi Ckk) Decorated 13pf Taxol-Gdp Microtubule
authors J.M.Atherton, Y.Luo, S.Xiang, C.Yang, K.Jiang, M.Stangier, A.Vemu, S.Wang, A.Roll-Mecak, M.O.Steinmetz, A.Akhmanova, M.Baldus, C.A.
compound source
Molecule: Tubulin Alpha-1b Chain
Chain: A, C
Synonym: Alpha-Tubulin Ubiquitous,Tubulin K-Alpha-1,Tubulin Ubiquitous Chain;
Other_details: Gtp
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Cell_line: Tsa201
Tissue: Embryonic Kidney

Molecule: Ckk Domain Protein
Chain: W
Engineered: Yes

Organism_scientific: Naegleria Gruberi
Organism_common: Amoeba
Organism_taxid: 5762
Gene: Naegrdraft_50049
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Tubulin Beta Chain
Chain: H, G
Synonym: Tubulin Beta-5 Chain
Other_details: Gdp Taxol

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Cell_line: Tsa201
Tissue: Embryonic Kidney
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.80 Å
ligand GDP, GTP, MG, TA1 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C


H, G


W


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (274 Kb) [Save to disk]
  • Biological Unit Coordinates (6quy.pdb1.gz) 263 Kb
  • LPC: Ligand-Protein Contacts for 6QUY
  • CSU: Contacts of Structural Units for 6QUY
  • Retrieve 6QUY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6QUY from S2C, [Save to disk]
  • View 6QUY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6QUY
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6quy_H] [6quy_A] [6quy_W] [6quy_G] [6quy_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6QUY
  • Community annotation for 6QUY at PDBWiki (http://pdbwiki.org)

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