6UDM Oxidoreductase date Sep 19, 2019
title Structure Of Human Cytochrome P450 1a1 With Duocarmycin Prod Ict-2726
authors A.G.Bart, E.E.Scott
compound source
Molecule: Cytochrome P450 1a1
Chain: A, B, C, D
Fragment: Unp Residues 35-512
Synonym: Cypia1,Cytochrome P450 Form 6,Cytochrome P450-C,Cy P450-P1,Hydroperoxy Icosatetraenoate Dehydratase;
Ec: 1.14.14.1,4.2.1.152
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cyp1a1
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606
symmetry Space Group: P 31 2 1
R_factor 0.209 R_Free 0.221
crystal
cell
length a length b length c angle alpha angle beta angle gamma
241.281 241.281 125.298 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.08 Å
ligand CPS, HEM, Q4P enzyme Oxidoreductase E.C.1.14.14.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B
  • demethylase activity
  • vitamin D 24-hydroxylase act...


    • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (593 Kb) [Save to disk]
  • Biological Unit Coordinates (6udm.pdb1.gz) 150 Kb
  • Biological Unit Coordinates (6udm.pdb2.gz) 151 Kb
  • Biological Unit Coordinates (6udm.pdb3.gz) 148 Kb
  • Biological Unit Coordinates (6udm.pdb4.gz) 148 Kb
  • LPC: Ligand-Protein Contacts for 6UDM
  • CSU: Contacts of Structural Units for 6UDM
  • Structure Factors (2703 Kb)
  • Retrieve 6UDM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6UDM from S2C, [Save to disk]
    • View 6UDM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6UDM
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6udm_C] [6udm_B] [6udm_A] [6udm_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6UDM
  • Community annotation for 6UDM at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science