6VW9 Transport Protein date Feb 19, 2020
title C-Terminal Regulatory Domain Of The Chloride Transporter Kcc Elegans, Proteolyzed During Crystallization
authors C.M.Zimanyi, J.Cheung
compound source
Molecule: K+Cl-Cotransporter
Chain: A
Fragment: C-Terminal Regulatory Domain
Engineered: Yes
Organism_scientific: Caenorhabditis Elegans
Organism_taxid: 6239
Gene: Kcc-1, Cele_r13a1.2, R13a1.2
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108

Molecule: K+Cl-Cotransporter
Chain: B
Fragment: C-Terminal Regulatory Domain
Engineered: Yes

Organism_scientific: Caenorhabditis Elegans
Organism_taxid: 6239
Gene: Kcc-1, Cele_r13a1.2, R13a1.2
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
symmetry Space Group: C 1 2 1
R_factor 0.183 R_Free 0.215
crystal
cell
length a length b length c angle alpha angle beta angle gamma
104.320 65.546 56.523 90.00 97.17 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand GOL, P33 enzyme
Primary referenceStructure of the Regulatory Cytosolic Domain of a Eukaryotic Potassium-Chloride Cotransporter., Zimanyi CM, Guo M, Mahmood A, Hendrickson WA, Hirsh D, Cheung J, Structure. 2020 Jul 10. pii: S0969-2126(20)30212-4. doi:, 10.1016/j.str.2020.06.009. PMID:32679039
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (109 Kb) [Save to disk]
  • Biological Unit Coordinates (6vw9.pdb1.gz) 206 Kb
  • LPC: Ligand-Protein Contacts for 6VW9
  • CSU: Contacts of Structural Units for 6VW9
  • Structure Factors (490 Kb)
  • Retrieve 6VW9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6VW9 from S2C, [Save to disk]
  • View 6VW9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6VW9
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6vw9_B] [6vw9_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6VW9
  • Community annotation for 6VW9 at PDBWiki (http://pdbwiki.org)

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