6WPF	Transferase Dna	date	Apr 27, 2020
title	Structure Of Hiv-1 Reverse Transcriptase (Rt) In Complex Wit And D4t
authors	N.Bertoletti, K.S.Anderson
compound		source
Molecule: Dna Primer 21-Mer Chain: P Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
Molecule: Dna Template 27-Mer Chain: T Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
Molecule: Reverse Transcriptaseribonuclease H Chain: A Synonym: Pr160gag-Pol Ec: 2.7.7.49, 2.7.7.7, 3.1.26.13 Engineered: Yes Mutation: Yes		Organism_scientific: Human Immunodeficiency Virus Type 1 Gr Subtype B (Isolate Hxb2); Organism_common: Hiv-1 Organism_taxid: 11706 Strain: Isolate Hxb2 Gene: Gag-Pol Expression_system: Escherichia Coli Bl21 Expression_system_taxid: 511693
Molecule: P51 Rt Chain: B Ec: 2.7.7.-,3.1.-.- Engineered: Yes Mutation: Yes		Organism_scientific: Human Immunodeficiency Virus Type 1 Gr Subtype B (Isolate Hxb2); Organism_common: Hiv-1 Organism_taxid: 11706 Strain: Isolate Hxb2 Gene: Gag-Pol Expression_system: Escherichia Coli Bl21 Expression_system_taxid: 511693
symmetry	Space Group: C 2 2 21	R_factor 0.182 R_Free 0.231
crystal cell	length a length b length c angle alpha angle beta angle gamma 165.569 170.468 103.343 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.53 Å
ligand	D4M, D4T, G47, GOL, MG, SO4	enzyme	Transferase E.C.2.7.7.49 BRENDA

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (369 Kb) [Save to disk] Biological Unit Coordinates (6wpf.pdb1.gz) 350 Kb LPC: Ligand-Protein Contacts for 6WPF CSU: Contacts of Structural Units for 6WPF Structure Factors (316 Kb) Retrieve 6WPF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6WPF from S2C, [Save to disk]

View 6WPF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 6WPF

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute Fold representative 6wpf from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6wpf_P] [6wpf_B] [6wpf_T] [6wpf_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 6WPF

Community annotation for 6WPF at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---