6YMD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	EDO, MLI, NA, PMP	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structural and kinetic properties of serine hydroxymethyltransferase from the halophytic cyanobacterium Aphanothece halophytica provide a rationale for salt tolerance., Nogues I, Tramonti A, Angelaccio S, Ruszkowski M, Sekula B, Contestabile R, Int J Biol Macromol. 2020 May 15;159:517-529. doi:, 10.1016/j.ijbiomac.2020.05.081. PMID:32417544

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (299 Kb) [Save to disk] Biological Unit Coordinates (6ymd.pdb1.gz) 293 Kb LPC: Ligand-Protein Contacts for 6YMD CSU: Contacts of Structural Units for 6YMD Structure Factors (4455 Kb) Retrieve 6YMD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6YMD from S2C, [Save to disk]

View 6YMD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6ymd_A] [6ymd_B] SWISS-PROT database:

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