6YPD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CL, DMS, EDO, KL8, PEG, ZN	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Bicyclic Boronates as Potent Inhibitors of AmpC, the Class C beta-Lactamase from Escherichia coli., Lang PA, Parkova A, Leissing TM, Calvopina K, Cain R, Krajnc A, Panduwawala TD, Philippe J, Fishwick CWG, Trapencieris P, Page MGP, Schofield CJ, Brem J, Biomolecules. 2020 Jun 12;10(6). pii: biom10060899. doi: 10.3390/biom10060899. PMID:32545682

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (134 Kb) [Save to disk] Biological Unit Coordinates (6ypd.pdb1.gz) 127 Kb LPC: Ligand-Protein Contacts for 6YPD CSU: Contacts of Structural Units for 6YPD Structure Factors (1585 Kb) Retrieve 6YPD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6YPD from S2C, [Save to disk]

View 6YPD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6ypd_A] SWISS-PROT database:

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