7EWM Transcription date May 25, 2021
title Native Crystal Structure Of S. Cerevisiae Csn12 In Complex W And Sem1
authors Z.Kuang, L.Niu
compound source
Molecule: Protein Thp3
Chain: A
Synonym: Tho-Related Protein 3
Engineered: Yes
 Organism_scientific: Saccharomyces Cerevisiae S288c
Organism_taxid: 559292
Gene: Thp3, Ypr045c, Yp9499.03c
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008

Molecule: Cop9 Signalosome Complex Subunit 12
Chain: B
Engineered: Yes
Organism_scientific: Saccharomyces Cerevisiae S288c
Organism_taxid: 559292
Gene: Csn12, Yjr084w, J1860
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008

Molecule: 26s Proteasome Complex Subunit Sem1
Chain: C
Engineered: Yes
Organism_scientific: Saccharomyces Cerevisiae S288c
Organism_taxid: 559292
Gene: Sem1, Dsh1, Ydr363w-A
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
symmetry Space Group: P 32 2 1
R_factor 0.222 R_Free 0.251
crystal
cell
length a length b length c angle alpha angle beta angle gamma
115.575 115.575 126.825 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.90 Å
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (256 Kb) [Save to disk]
  • Biological Unit Coordinates (7ewm.pdb1.gz) 249 Kb
  • CSU: Contacts of Structural Units for 7EWM
  • Structure Factors (565 Kb)
  • Retrieve 7EWM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 7EWM from S2C, [Save to disk]
    • View 7EWM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 7EWM
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [7ewm_C] [7ewm_B] [7ewm_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 7EWM
  • Community annotation for 7EWM at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science