7JKQ	Immune System, Hydrolase	date	Jul 28, 2020
title	Human Dpp9-Card8 Complex
authors	H.Sharif, L.R.Hollingsworth
compound		source
Molecule: Dipeptidyl Peptidase 9 Chain: A, D Synonym: Dp9,Dipeptidyl Peptidase Iv-Related Protein 2,Dprp Dipeptidyl Peptidase Ix,Dpp Ix,Dipeptidyl Peptidase-Like Pr Dplp9,Dpp9; Ec: 3.4.14.5 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Dpp9, Dprp2 Expression_system: Homo Sapiens Expression_system_common: Human Expression_system_taxid: 9606 Expression_system_cell_line: Hek293
Molecule: Caspase Recruitment Domain-Containing Protein 8 Chain: B, C Synonym: Apoptotic Protein Ndpp1,Card-Inhibitor Of Nf-Kappa Activating Ligand,Cardinal,Dacar,Tumor Up-Regulated Card-Co Antagonist Of Casp9,Tucan,Card8; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Card8, Kiaa0955, Ndpp1 Expression_system: Homo Sapiens Expression_system_common: Human Expression_system_taxid: 9606 Expression_system_cell_line: Hek293
symmetry	Space Group: P 1	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 1.000 1.000 1.000 90.00 90.00 90.00
method	Electron Microscopy	resolution	3.30 Å
ligand		enzyme	Hydrolase E.C.3.4.14.5 BRENDA

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (305 Kb) [Save to disk] Biological Unit Coordinates (7jkq.pdb1.gz) 292 Kb CSU: Contacts of Structural Units for 7JKQ Retrieve 7JKQ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 7JKQ from S2C, [Save to disk]

View 7JKQ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 7JKQ

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [7jkq_B] [7jkq_C] [7jkq_D] [7jkq_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 7JKQ

Community annotation for 7JKQ at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---