8B48 Hydrolase date Sep 20, 2022
title Structure Of Lentithecium Fluviatile Carbohydrate Esterase F Ce15 Family (Lfce15c)
authors K.Scholzen, S.Mazurkewich, J.C.N.Poulsen, J.Larsbrink, L.Lo Legg
compound source
Molecule: Carbohydrate Esterase Family 15 Protein
Chain: A, B, C, D
Engineered: Yes
Organism_scientific: Lentithecium Fluviatile
Organism_taxid: 690899
Gene: K458draft_349146
Expression_system: Komagataella Pastoris
Expression_system_taxid: 4922
Expression_system_strain: Smd1168h
symmetry Space Group: P 1
R_factor 0.238 R_Free 0.298
crystal
cell
length a length b length c angle alpha angle beta angle gamma
70.740 79.570 86.010 113.32 98.53 94.44
method X-Ray Diffractionresolution 2.65 Å
ligand BMA, FMT, MAN, NAG enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (245 Kb) [Save to disk]
  • Biological Unit Coordinates (8b48.pdb1.gz) 62 Kb
  • Biological Unit Coordinates (8b48.pdb2.gz) 63 Kb
  • Biological Unit Coordinates (8b48.pdb3.gz) 62 Kb
  • Biological Unit Coordinates (8b48.pdb4.gz) 63 Kb
  • LPC: Ligand-Protein Contacts for 8B48
  • CSU: Contacts of Structural Units for 8B48
  • Structure Factors (443 Kb)
  • Retrieve 8B48 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 8B48 from S2C, [Save to disk]
  • View 8B48 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 8B48
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [8b48_A] [8b48_B] [8b48_D] [8b48_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 8B48
  • Community annotation for 8B48 at PDBWiki (http://pdbwiki.org)

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