1A17 Hydrolase date Dec 23, 1997
title Tetratricopeptide Repeats Of Protein Phosphatase 5
authors A.K.Das, P.T.W.Cohen, D.Barford
compound source
Molecule: Serinethreonine Protein Phosphatase 5
Chain: A
Fragment: Protein Interacting Domain
Synonym: Tetratricopeptide, Trp
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Tissue: Brain
Gene: Ppp5
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Pt7.7
Expression_system_tissue: Brain
Expression_system_plasmid: Pt7.7
Expression_system_gene: Ppp5
symmetry Space Group: I 4 2 2
R_factor 0.201 R_Free 0.298
length a length b length c angle alpha angle beta angle gamma
90.060 90.060 104.450 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.45 Å
ligand SO4 enzyme Hydrolase E.C. BRENDA
note 1A17 is a representative structure
related structures by homologous chain: 1WAO

Primary referenceThe structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions., Das AK, Cohen PW, Barford D, EMBO J 1998 Mar 2;17(5):1192-9. PMID:9482716
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (32 Kb) [Save to disk]
  • Biological Unit Coordinates (1a17.pdb1.gz) 110 Kb
  • Biological Unit Coordinates (1a17.pdb2.gz) 56 Kb
  • LPC: Ligand-Protein Contacts for 1A17
  • CSU: Contacts of Structural Units for 1A17
  • Likely Quarternary Molecular Structure file(s) for 1A17
  • Structure Factors (81 Kb)
  • Retrieve 1A17 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1A17 from S2C, [Save to disk]
  • Re-refined 1a17 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1A17 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1A17
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1A17, from MSDmotif at EBI
  • Genome occurence of 1A17's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1a17__, region [Jmol] [rasmolscript] [script source]
  • Fold representative 1a17 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1a17_A] [1a17]
  • SWISS-PROT database: [P53041]
  • Domain organization of [PPP5_HUMAN] by SWISSPFAM
  • Domain found in 1A17: [TPR ] by SMART
  • Other resources with information on 1A17
  • Community annotation for 1A17 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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