1WAO Hydrolase date Oct 27, 2004
title Pp5 Structure
authors D.Barford
compound source
Molecule: Serinethreonine Protein Phosphatase 5
Chain: 1, 2, 3, 4
Synonym: Pp5, Protein Phosphatase T, Pp-T, Ppt, Protein Phosphatase 5;
Ec: 3.1.3.16
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl834
Expression_system_plasmid: Pgex6p
symmetry Space Group: P 1 21 1
R_factor 0.247 R_Free 0.290
crystal
cell
length a length b length c angle alpha angle beta angle gamma
51.740 117.540 200.410 90.00 93.79 90.00
method X-Ray Diffractionresolution 2.9 Å
ligand MN enzyme Hydrolase E.C.3.1.3.16 BRENDA
related structures by homologous chain: 1A17
Gene
Ontology
ChainFunctionProcessComponent
4, 1, 3, 2


Primary referenceMolecular basis for TPR domain-mediated regulation of protein phosphatase 5., Yang J, Roe SM, Cliff MJ, Williams MA, Ladbury JE, Cohen PT, Barford D, EMBO J. 2005 Jan 12;24(1):1-10. Epub 2004 Dec 2. PMID:15577939
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (311 Kb) [Save to disk]
  • Biological Unit Coordinates (1wao.pdb1.gz) 80 Kb
  • Biological Unit Coordinates (1wao.pdb2.gz) 79 Kb
  • Biological Unit Coordinates (1wao.pdb3.gz) 79 Kb
  • Biological Unit Coordinates (1wao.pdb4.gz) 79 Kb
  • LPC: Ligand-Protein Contacts for 1WAO
  • CSU: Contacts of Structural Units for 1WAO
  • Likely Quarternary Molecular Structure file(s) for 1WAO
  • Retrieve 1WAO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1WAO from S2C, [Save to disk]
    • View 1WAO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1WAO
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1WAO, from MSDmotif at EBI
  • Fold representative 1wao from FSSP and Dali (Families of Structurally Similar Proteins)
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1wao_4] [1wao_1] [1wao_2] [1wao_3] [1wao]
  • SWISS-PROT database: [P53041]
  • Domain organization of [PPP5_HUMAN] by SWISSPFAM
  • Domains found in 1WAO: [PP2Ac] [TPR ] by SMART
    • Other resources with information on 1WAO
  • Community annotation for 1WAO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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