1A66 Transcription Dna date Mar 06, 1998
title Solution Nmr Structure Of The Core Nfatc1dna Complex, 18 Structures
authors P.Zhou, L.J.Sun, V.Doetsch, G.Wagner, G.L.Verdine
compound source
Molecule: Dna (5'-D(Cpgpapgpgpapapapaptptpg)- 3');
Chain: B
Fragment: 12mer Dna Containing Murine Arre2 Site
Engineered: Yes
Synthetic: Yes

Molecule: Dna (5'-D(Cpapaptptptptpcpcptpcpg)- 3');
Chain: C
Fragment: 12mer Dna Containing Murine Arre2 Site
Engineered: Yes

Synthetic: Yes

Molecule: Core Nfatc1
Chain: A
Fragment: Dna Binding Domain Of Nfatc1
Engineered: Yes
Mutation: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Cell_line: Bl21
Gene: Nfatc1(416-591)
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21 (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Plm1-Nfatc1(416-591)
Expression_system_gene: Nfatc1(416-591)
methodSolution NMR
related structures by homologous chain: 1NFA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structure of the core NFATC1/DNA complex., Zhou P, Sun LJ, Dotsch V, Wagner G, Verdine GL, Cell 1998 Mar 6;92(5):687-96. PMID:9506523
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1094 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1A66
  • Retrieve 1A66 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1A66 from S2C, [Save to disk]
  • View 1A66 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1A66
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1A66, from MSDmotif at EBI
  • Genome occurence of 1A66's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1a66a_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1a66 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1a66_B] [1a66] [1a66_C] [1a66_A]
  • SWISS-PROT database: [O95644]
  • Domain organization of [NFAC1_HUMAN] by SWISSPFAM
  • Other resources with information on 1A66
  • Community annotation for 1A66 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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