1A6Z Mhc Class I Complex date Mar 04, 1998
title Hfe (Human) Hemochromatosis Protein
authors J.A.Lebron, M.J.Bennett, D.E.Vaughn, A.J.Chirino, P.M.Snow, G.A.Mintier, J.N.Feder, P.J.Bjorkman
compound source
Molecule: Hfe
Chain: A, C
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Organ: Ovary
Gene: Hfe
Expression_system: Cricetulus Griseus
Expression_system_common: Chinese Hamster
Expression_system_taxid: 10029
Expression_system_cell_line: Cho
Expression_system_cellular_location: Secreted
Expression_system_vector: Pbj5-Gs

Molecule: Beta-2-Microglobulin
Chain: B, D

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Organ: Ovary
symmetry Space Group: P 21 21 21
R_factor 0.233 R_Free 0.277
crystal
cell
length a length b length c angle alpha angle beta angle gamma
68.800 100.100 147.600 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.60 Å
related structures by homologous chain: 1AO7, 1DE4, 1RJZ
Gene
Ontology
ChainFunctionProcessComponent
A, C


D, B
  • cellular response to iron io...

  • Primary referenceCrystal structure of the hemochromatosis protein HFE and characterization of its interaction with transferrin receptor., Lebron JA, Bennett MJ, Vaughn DE, Chirino AJ, Snow PM, Mintier GA, Feder JN, Bjorkman PJ, Cell 1998 Apr 3;93(1):111-23. PMID:9546397
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (129 Kb) [Save to disk]
  • Biological Unit Coordinates (1a6z.pdb1.gz) 64 Kb
  • Biological Unit Coordinates (1a6z.pdb2.gz) 64 Kb
  • CSU: Contacts of Structural Units for 1A6Z
  • Likely Quarternary Molecular Structure file(s) for 1A6Z
  • Retrieve 1A6Z in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1A6Z from S2C, [Save to disk]
  • View 1A6Z in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1A6Z
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1A6Z, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1a6za1, region A:182-275 [Jmol] [rasmolscript] [script source]
        - Domain d1a6za2, region A:4-181 [Jmol] [rasmolscript] [script source]
        - Domain d1a6zb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1a6zc1, region C:182-275 [Jmol] [rasmolscript] [script source]
        - Domain d1a6zc2, region C:4-181 [Jmol] [rasmolscript] [script source]
        - Domain d1a6zd_, region D [Jmol] [rasmolscript] [script source]
  • Fold representative 1a6z from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1a6z_A] [1a6z_B] [1a6z] [1a6z_C] [1a6z_D]
  • SWISS-PROT database: [P61769] [Q30201]
  • Domain organization of [B2MG_HUMAN] [HFE_HUMAN] by SWISSPFAM
  • Domain found in 1A6Z: [IGc1 ] by SMART
  • Other resources with information on 1A6Z
  • Community annotation for 1A6Z at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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