1BM5 Retinoic-Acid Transport date Jul 28, 1998
title The Solution Structure Of A Site-Directed Mutant (R111m) Of Human Cellular Retionic Acid Binding Protein-Type II, Nmr, 31 Structures
authors H.Wang, H.Yan
compound source
Molecule: Cellular Retinoic Acid Binding Protein-Type II
Chain: A
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Cell_line: Bl21
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 (De3) Plyss
Expression_system_cellular_location: Cytoplasm
Expression_system_vector_type: Plasmid
Expression_system_vector: Plasmid
Expression_system_plasmid: Pet-17b
methodSolution NMR
related structures by homologous chain: 1BLR, 1CBR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceNMR study suggests a major role for Arg111 in maintaining the structure and dynamical properties of type II human cellular retinoic acid binding protein., Wang L, Yan H, Biochemistry 1998 Sep 15;37(37):13021-32. PMID:9737883
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1138 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1BM5
  • Original NMR restraints for 1BM5 from PDB
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  • SEQRES to COORDINATES correlation for 1BM5 from S2C, [Save to disk]
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  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1BM5, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1bm5__, region [Jmol] [rasmolscript] [script source]
  • Fold representative 1bm5 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
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  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1bm5_A] [1bm5]
  • SWISS-PROT database: [P29373]
  • Domain organization of [RABP2_HUMAN] by SWISSPFAM
  • Other resources with information on 1BM5
  • Community annotation for 1BM5 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
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  • Domain movements in 1BM5 from the Database of Macromolecular Movements.
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