1BSW Metal Binding Protein date Aug 31, 1998
title Acutolysin A From Snake Venom Of Agkistrodon Acutus At Ph 7.
authors W.Gong, X.Zhu, S.Liu, M.Teng, L.Niu
compound source
Molecule: Protein (Acutolysin A)
Chain: A
Synonym: Hemorrhagin, Iaah-I
 Organism_scientific: Deinagkistrodon Acutus
Organism_common: Chinese Moccasin
Organism_taxid: 36307
Secretion: Venom
symmetry Space Group: P 43 21 2
R_factor 0.171 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
63.170 63.170 95.350 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.95 Å
ligand CA, ZN enzyme
related structures by homologous chain: 1BKC, 1BUD
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structures of acutolysin A, a three-disulfide hemorrhagic zinc metalloproteinase from the snake venom of Agkistrodon acutus., Gong W, Zhu X, Liu S, Teng M, Niu L, J Mol Biol 1998 Oct 30;283(3):657-68. PMID:9784374
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (37 Kb) [Save to disk]
  • Biological Unit Coordinates (1bsw.pdb1.gz) 33 Kb
  • LPC: Ligand-Protein Contacts for 1BSW
  • CSU: Contacts of Structural Units for 1BSW
  • Likely Quarternary Molecular Structure file(s) for 1BSW
  • Retrieve 1BSW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BSW from S2C, [Save to disk]
    • View 1BSW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1BSW
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1BSW, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1bswa_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1bsw_A] [1bsw]
  • SWISS-PROT database: [Q9PW35]
  • Domain organization of [VMACA_AGKAC] by SWISSPFAM
    • Other resources with information on 1BSW
  • Community annotation for 1BSW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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